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Pull requests: DataBiosphere/azul

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Pull requests list

Promotion 2026-04-28 anvilprod (#7964) upgrade [process] PR includes commit requiring manual upgrade
#7967 opened Apr 28, 2026 by achave11-ucsc Member Loading…
23 of 79 tasks
1
@hannes-ucsc @achave11-ucsc
3
Promotion 2026-04-28 prod (#7949, #7964) hotfix [process] An PR with an urgent fix for prod reindex:partial [process] PR allows for (de)indexing a specific source or catalog reindex:prod [process] PR requires reindexing prod upgrade [process] PR includes commit requiring manual upgrade
#7966 opened Apr 28, 2026 by achave11-ucsc Member Loading…
23 of 70 tasks
2
@hannes-ucsc @achave11-ucsc
3
Upgrade software dependencies 2026-04-27 (#7937, #7962) backup:gitlab [process] PR requires backing up GitLab instances deploy:gitlab [process] PR requires deploying `gitlab` component deploy:runner [process] PR requires deploying `runner` component deploy:shared [process] PR requires deploying `shared` component reqs [process] PR includes commit requiring ``make requirements``
#7965 opened Apr 28, 2026 by achave11-ucsc Member Loading…
26 of 86 tasks
2
@hannes-ucsc @achave11-ucsc
2
Implement authorization code flow with Azul and Data Browser (#7954) API API change affecting callers upgrade [process] PR includes commit requiring manual upgrade
#7961 opened Apr 27, 2026 by hannes-ucsc Member Loading… 100+
1
@hannes-ucsc @achave11-ucsc
5
Bump gitpython from 3.1.46 to 3.1.47 dependencies [subject] External software packages that the system depends on python Pull requests that update python code
#7959 opened Apr 26, 2026 by dependabot Bot Loading…
@achave11-ucsc
Formalize temporary SA handovers (#7909) 0 reviews [process] Lead didn't request any changes
#7944 opened Apr 21, 2026 by achave11-ucsc Member Loading… 100+
1
@hannes-ucsc @achave11-ucsc
16
Mirror MA files into dedicated bucket (#7927) 0 reviews [process] Lead didn't request any changes upgrade [process] PR includes commit requiring manual upgrade
#7933 opened Apr 13, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
20
Cover query service with mypy (#6821) 1 review [process] Lead requested changes once partial [process] PR is does not completely resolve associated ticket
#7916 opened Apr 8, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
8
Use requester-pays for mirroring in AnVIL deployments (#7794)
#7885 opened Mar 19, 2026 by nadove-ucsc Contributor • Draft 100+
1
@nadove-ucsc
3
Add support for HCA tissue atlas (#7128) 1 review [process] Lead requested changes once reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#7877 opened Mar 17, 2026 by dsotirho-ucsc Contributor Loading… 100+
1
@hannes-ucsc @dsotirho-ucsc
16
Fix: PFB manifest generator uses server-side paging (#7872)
#7873 opened Mar 17, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
14
Fix: Manifest IT fails with pinned seed (#7835)
#7850 opened Mar 10, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
7
Fix: OpenSearch queries are huge (azul-private#316) 1 review [process] Lead requested changes once
#7775 opened Feb 12, 2026 by nadove-ucsc Contributor Loading… 100+
@nadove-ucsc
13
Fix: Eliminate uses of requests library (#7633) 0 reviews [process] Lead didn't request any changes partial [process] PR is does not completely resolve associated ticket
#7745 opened Feb 4, 2026 by achave11-ucsc Member Loading… 100+
1
@hannes-ucsc @achave11-ucsc
26
OpenSearch queries include many redundant source IDs (#7644)
#7727 opened Jan 29, 2026 by nadove-ucsc Contributor • Draft 100+
1
@nadove-ucsc
1
Fix: Accumulator overflow during aggregation (#6793) 0 reviews [process] Lead didn't request any changes API API change affecting callers reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#7641 opened Dec 12, 2025 by dsotirho-ucsc Contributor Loading… 100+
1
@hannes-ucsc @dsotirho-ucsc
43
Fix: Can't use curl to download a single manifest in one invocation (#5918) 4+ reviews [process] Lead requested changes four times or more API API change affecting callers
#6099 opened Mar 26, 2024 by dsotirho-ucsc Contributor Loading… 100+
1
@dsotirho-ucsc
107
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